QIIME 2 Docs

PepSIRF Plugins for QIIME 2 User Documentation¶

This site contains the official user documentation for PepSIRF-related plugins for QIIME™ 2: pepsirf, ps-plot, and autopepsirf. This documentation includes installation instructions, tutorials, and other important information.

Table of contents¶

  • Tutorials
    • DiffEnrich Analysis Tutorial - Multiple Interface Edition
    • Ps-plot Tutorials - Multiple Interface Edition
    • Ps-qc Tutorials - CLI Edition (more to come)
    • q2-pepsirf Tutorials - Multiple Interface Edition
    • PSEA Tutorials - CLI Edition (more to come)
  • Available plugins
    • autopepsirf
    • pepsirf
    • ps-plot
  • Installation
    • q2-pepsirf
    • q2-ps-plot
    • q2-ps-qc
    • q2-autopepsirf
    • q2-PSEA
  • QIIME 2 Import and Export
    • Import and Export Examples
    • Import and Export File Format Tables
  • TSV/Dir Pipelines
    • TSV/Dir Pipeline Information

Table of Contents

  • Tutorials
  • Available plugins
  • Installation
  • QIIME 2 Import and Export
  • TSV/Dir Pipelines

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