QIIME 2 Docs

pepsirf¶

Description Qiime2 Plug-in for the use of pepsirf within qiime.
Version 2021.12+81.g5bbf484
Website https://github.com/LadnerLab/q2-pepsirf
Support Please post to the QIIME 2 forum for help with this plugin: https://forum.qiime2.org
q2cli Invocation
qiime pepsirf
Artifact API Import
from qiime2.plugins import pepsirf

Methods¶

  • bin: pepsirf bin module
  • deconv-batch: pepsirf deconv batch mode module
  • deconv-singular: pepsirf deconv singular mode module
  • demux: pepsirf demux module
  • enrich: pepsirf enrich module
  • infoSNPN: pepsirf info (samples/peptide names) module
  • infoSumOfProbes: pepsirf info (sum of probes) module
  • link: pepsirf link module
  • norm: pepsirf norm module
  • subjoin: pepsirf subjoin module
  • zscore: pepsirf zscore module

Table of Contents

  • Tutorials
  • Available plugins
    • autopepsirf
    • pepsirf
    • ps-plot
  • Installation
  • QIIME 2 Import and Export
  • TSV/Dir Pipelines

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